BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015C08LP1|AL426820
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig598 1857 0.0
>3x_Contig598
Length = 2989
Score = 1857 bits (936), Expect = 0.0
Identities = 972/978 (99%), Gaps = 5/978 (0%)
Strand = Plus / Minus
Query: 1 gggttcaagatcttgtttgatgcaatgaacggtgtcaccggtccttacggtgaagctctt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2377 gggttcaagatcttgtttgatgcaatgaacggtgtcaccggtc-ttacggtgaagctctt 2319
Query: 61 ttcgttaaggaattgggtctaccagaatcatctttgcaaaactaccatccaaaaccagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2318 ttcgttaaggaattgggtctaccagaatcatctttgcaaaactaccatccaaaaccagat 2259
Query: 121 ttcggtgggttgcaccctgaccctaatttgacttacgcccacactttagtggagagagtc 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2258 ttcggtgg-ttgcaccctgaccctaatttgacttacgcccacactttagtggagagagtc 2200
Query: 181 gacaagtacggaattcaattcggtgctgcctccgatggtgacggtgatagaaatatgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2199 gacaagtacggaattcaattcggtgctgcctccgatggtgacggtgatagaaatatgatc 2140
Query: 241 tatggtgctggtccagcatttgtctcgccaggtgattctgttgccatcattgccgagtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2139 tatggtgctggtccagcatttgtctcgccaggtgattctgttgccatcattgccgagtac 2080
Query: 301 gcttctgctatcccttatttcaagaaa-caaggaatttacggtttagctcgttcgttccc 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2079 gcttctgctatcccttatttcaagaaagcaaggaatttacggtttagctcgttcgttccc 2020
Query: 360 aacgtcttctgccattgatagagtcgctaaggaacaaggtttgaactgttatgaggttcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2019 aacgtcttctgccattgatagagtcgctaaggaacaaggtttgaactgttatgaggttcc 1960
Query: 420 taccggttggaagtttttctgtgccttgttcgatgcaaagaaactttcaatctgtggtga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1959 taccggttggaagtttttctgtgccttgttcgatgcaaagaaactttcaatctgtggtga 1900
Query: 480 agaatcattcggtaccggatctaaccacgttagagagaaggatggtgtatgggccatcat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 agaatcattcggtaccggatctaaccacgttagagagaaggatggtgtatgggccatcat 1840
Query: 540 ggcatggttaaacattttggctatttacaaccaaagattcccaaacaaagaagcttcgat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1839 ggcatggttaaacattttggctatttacaaccaaagattcccaaacaaagaagcttcgat 1780
Query: 600 taagtctattcaaacggatttctggcaaaaatacggtcgtactttctttactcgttacga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 taagtctattcaaacggatttctggcaaaaatacggtcgtactttctttactcgttacga 1720
Query: 660 ttttgagaacttatcgagcgaagacgctggtaaggtcattttgctgttgcaaaactacgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 ttttgagaacttatcgagcgaagacgctggtaaggtcattttgctgttgcaaaactacgt 1660
Query: 720 cgctgaccctgaatctataaagggtaccaaattcccagctgatgattctttgacagtggt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 cgctgaccctgaatctataaagggtaccaaattcccagctgatgattctttgacagtggt 1600
Query: 780 agaaggtggtgacttctcttacacagatctagatgggtcagtttcaagccatcaaggttt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 agaaggtggtgacttctcttacacagatctagatgggtcagtttcaagccatcaaggttt 1540
Query: 840 atacgtcagattatctaatggtgttcgtttcgttgtaagactctcaggtacaggttcttc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 atacgtcagattatctaatggtgttcgtttcgttgtaagactctcaggtacaggttcttc 1480
Query: 900 cggtgccactatcagattatacgtggaa-gttacactaatgacggatc-aaawacgaaca 957
|||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 1479 cggtgccactatcagattatacgtggaacgttacactaatgacggatcaaaatacgaaca 1420
Query: 958 gaccgctgaagaattctt 975
||||||||||||||||||
Sbjct: 1419 gaccgctgaagaattctt 1402
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6515
Number of Sequences: 1807
Number of extensions: 6515
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)